All Classes
AboutPane
AdvancedRandomPlacing
AlgorithmWizzard
Application_Constants
Atom
Atom_3D
Atom_Creator_3D
Atom_Level_Minimizer
AutoBox
Bond
CalculationManager
CameraMode
ChangeSizeDialog
CM2_CONSTANTS
CM2_CONSTANTS.ALGORITHMS
CM2_CONSTANTS.ATOMVALUES
CM2_CONSTANTS.DEBUG
CM2_CONSTANTS.GENERAL
CM2_CONSTANTS.GUI_SETTINGS_AND_CONTROLS
CM2_CONSTANTS.IMAGES_AND_ICONS
CM2_CONSTANTS.IO
CM2_CONSTANTS.J3D
CM2_CONSTANTS.MEMBRANE_SIZES
CM2_CONSTANTS.MISC
CM2_CONSTANTS.MOLECULE_DEFAULTS
CM2_CONSTANTS.RENDERMODE
CM2_CONSTANTS.THREADS
Cm2_IconDepot
Cm2_Toolkit
Cm2_Toolkit.Membrane_Image2D_Generator
Cm2_Toolkit.ToolkitMembranePackingAlgorithm
CM2AdditionalListener
ColumnSorter
Compatibility
CompatibilityPanel
ComponentView
ConfigIO
ConfigParser
ConformationPanel
ConfParser
Connection
Constraint_3D
ControlPanel
CoordinateBar
CoordinateTransformationHints
DatabaseIO
DatabaseView
DatabaseViewListener
DataPool
DataPool.AlgorithmSettings
DataPool.APLVoroSettings
DataPool.AtomValues
DataPool.CoordinateTransformationSettings
DataPool.DNDBridge
DataPool.InternetSettings
DataPool.IO
DataPool.J3DSettings
DataPool.JmolSettings
DataPool.LimitationSettings
DataPool.PPESettings
Display
Distributor
EditDBEntryDialog
EditDBEntryDialogListener
Energies
EnergyFunction
Engine
EnterMatrixDialog
FileIOHandler
GlobalDatabaseBrowser
GranularityPanel
GraphPanel
Gui
GuiListener
HelpBtn
HelpDialog
Hud
IllegalOperationException
Installer
IntersectionDeleter
IntersectionsDisplayer
IntersectManager
InvalidEntriesException
J3DSettingsDialog
Layer
LimitedDocument
LinearPlacing
Lipid
Lipid_3D
MainGui
ManageTitleSectionDialog
Membrane3D
MembraneMetaInfo
MembraneModel
MembranePackingAlgorithm
MembranePackingAlgorithmGUI
MembranePackingAlgorithmInterface
MembraneShifter
MembraneView
MembraneViewListener
MembraneXmlReader
MembraneXmlWriter
MicroDomain
MicroDomain_3D
MicroDomainManager
MIFHandler
Molecule
Molecule_3D
Molecule_Profile_IO
MoleculeEditor
MoleculeEditorToolbar
MoleculeProfile
MRNA
MyBounds
MyData
MyDefaults
MyFCAccessory
MyGradientBufferedImage
MyJRadioButton
MylFCAccessoryForGenerating
MyNumberTextField
NewMembraneDialog
OPMConnection
OrbitBehaviorAdvanced
ParameterMatrixPanel
Particle
ParticlePropertiesPanel
PDBFileBrowser
PdbReader_3D
PdbSettingsWindow
PdbTMConnection
PDBWriter
PickNDragManager
Plugin
PluginIO
PluginManager
PPE_CONSTANTS
PPE_CONSTANTS.CONF_PARSER
PPE_CONSTANTS.CONNECTION
PPE_CONSTANTS.DB
PPE_CONSTANTS.IO
PPE_CONSTANTS.MIFILE
PPE_CONSTANTS.PPE_UPDATER
PPEUpdater
PropertiesView
Protein
Protein_3D
ProtocolDialog
RandomPlacing
Raster
ReversePDBParser
RotationToolkit
SAXCustomizer
Searcher
SearchListener
SelectionBox
SetUpConnectionsDialog
SimpleRandom
SimulatedAnnealing
Start
StartMain
StatisticsView
StatusDialog
TestArea
Tetris
TheWandererRookie
UniqueRandom
XMLCustomizer