Because CELLmicrocosmos 4.2 PathwayIntegration (CmPI) is currently run as a PreRelease, there maybe daily updates of the software. These changes are applied as soon as you start the program while you are online. Just start it now!

Therefore, actual changes are tracked on this page.

News 16th April 2022

We published a new book chapter in the Springer book: "Integrative Bioinformatics"! The cell models we used as the base for this chapter were created with the PathwayIntegration! More info at our general NEWS page.

News 18th August 2020

The Beta Release of the brand new Java 3D 1.7_pre1 integration is online! As with newer Java 8 versions the old self-executables seem not to run anymore, we upgraded. Java 3D 1.7_pre1 from JogAmp runs already very good since a longer time in the MembraneEditor. Let us know if you run into trouble with the new version. Please proceed to the start section.

News 22th November 2015

The first brand new self-exectuables are available! Please proceed to the start section.

News 18th November 2015

We just noticed that our IEEE paper from the Big Data Visual Analytics conference is published. Within the next days, the new version of the CellExplorer will be made available here. This version contains a number of changes and improvements in comparison to the previous version. And if you are using a zSpace, here is another important info for you: there will be a special version for the zSpace! We will try to put it online until next week Monday.

News 6th July 2015

After one annoying year of complaining, we got a new COMODO certificate which fixed the problem with the warning messages.

News 16th July 2014

We just got a new SSL certificate from COMODO and this one makes troubles. Java will complain and also the browser, if you are using the https protocol. We are working on this issue, but you can just continue to use our tools without any drawbacks - just ignore the warning during the application start.

Attention: Manual in progress!

The Manual is not completely finished yet. You find the initial help pages at Help -> Help Contents. We are working on it!


19.-20.02.2015 Changes

  • The major server is currently being updated to be extended by a new UniProt integration. Therefore, the localization will currently not work. Please note that a complete new version of CmPI will come soon.

30.04.2014 Changes

  • Fixed a bug which occured during the network mapping process if the second node ID was missing and some very special cases.

04.04.2014 Changes

  • The old server is moving and the new one is back from holidays, so switched back to the new and faster server

14.03.2014 Changes

  • Switched back to Java 6 compilation, enabling Iced Tea Webstart on Linux Distributions like Ubuntu, while maintaining Java 7 Update 51 compatibility
  • Fixed Java 3D starting process error, including an information if Java 3D fails in the initial starting process on some Java distributions
  • Our fast server is actually in holidays, therefore switched back to slightly slower server
  • Updated Website based on new 2014 layout first used for Cm2.2.2 release

18.01.2014 Changes

  • Fixed codebase and missing permissions warnings for library jars

05.01.2014 Changes

  • Newly signed Java 3D binaries uploaded, no more signature warnings during installing Java 3D

06.12.2013 Changes

  • Connection to a new, faster server via web service connection
  • 2D Viewer: Gem layout added
  • 3D Viewer: Solved mistake during computation of Golden Section and Rakhmanov, Saff & Zhou distribution modes in ISOMLayout and UUUSphereLayout
  • Stereoscopy Update
    • StereoView: Added side-by-side stereo support for Consumer Stereo Monitors (such as the LG D2343P)
    • QuadStereo: Added functionality to automatically recognize professional stereoscopic hardware (such as nVidia Quadro (FX) (R) cars or Asus Fire GL (R) cards)

06.11.2013 Changes

  • Improved asynchronous Web Service
  • Drastically improved server-side web service connection (higher reliability)

21.10.2013 Changes

  • Cell Components in Wrl format added, to be found in the directory user/Cm1_Workspace/Wrl_Files
  • Switched to English Language version

19.02.2013 Changes

  • Problems with starting page solved
  • Changes section added to Website

18.02.2013 PreRelease