JBCB2013

Subcellular Localization Charts:
A new visual Methodology for the semi-automatic Localization of protein-related Data Sets

This email address is being protected from spambots. You need JavaScript enabled to view it. , Benjamin Kormeier, Pavel S. Demenkov, Patrizio Arrigo, Klaus Hippe, Alexey V. Kochetov, Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Ralf Hofestädt

Journal of Bioinformatics and Computational Biology, 11(1):134005, 2013. Online Journal: http://www.worldscientific.com/doi/abs/10.1142/S0219720013400052

Supplements

Supplementary_Data_JBCB13 (ZIP)

This package contains the networks and project files discussed in the manuscript. Just use CmPI/Cm4 to load the .Cm4-files found in the package:

MPDZ_HPRD+ANDCellPubMed_08022012.Cm4

The original file after parsing the results from DAWIS-M.D. and ANDCell.

MPDZ_HPRD+ANDCellPubMed_08022012_prioritized.Cm4

The prioritized network representing the final state of the network as seen in Figure 5.

MPDZ_HPRD+ANDCellPubMed_08022012_prioritized+tz_1_41.Cm4

The same prioritized network correlated with the virtual animal cell shown in Figure 6.