Subcategories
Cm2help 1. Introduction
Cm2help 2. The GUI
Cm2help 3. Managing local PDB Files
Cm2help 4. The PDB Integration
Cm2help 5. Building a Membrane
Cm2help 6. Special Membrane Properties
Cm2help 7. Atomic Representation
Cm2help 8. The Lipid Bilayer
Cm2help 9. Generating Output
Cm2help More about the Editor
Cm2 MembraneEditor
IetpShops , Air Match Jordan XIII Michael Finley Autographed Mavs PE - 106 Release Date + Where to Buy - Women's Air Jordan 1 Mid Surfaces in Lucky Green and Aquatone DZ4137
Luxury Online Shop
nike outlet at tanger outlet mall
AIR Polaire JORDAN8 “Aqua” DZ3356 - Кросівки jordan delta mid dc2130 006 , 001 - 127-0Shops
200 Release Date - nike gold air chukka moc high school - SBD - nike gold air yeezy glow in the dark sneakers boys Rattan Obsidian CZ4149
Air Jordan 5 UNC University Blue DV1310 401 Release Date 3
air jordan 28 elephant 555109 004
Air Jordan 35 Morpho Guo Ailun CZ8153 100 Release Date 1
Nike SB Dunk high premium doom sneaker talk
preview nike air max plus unity dz4509 001
CELLmicrocosmos project
Cm1 CellExplorer
Cm3 CellEditor
Cm4 PathwayIntegration
Cm5 CellVisualization
Cm neXt workshop
project ...
news
posters
start ...
startCm2 (SSL)
download ...
downloadCm2 (SSL)
membrane files
help
1. Introduction ...
1.1. About the MembraneEditor
1.2 Features
1.3 The UI Components
1.4 Requirements
2. The GUI ...
2.1 Using the GUI
2.2 Shortcuts
2.3 3D Stereoscopy
3. Managing local PDB Files ...
3.1 Setting a Database
3.2 Handling your files
3.3 Gaining Information
3.4 Managing Models
4. The PDB Integration ...
4.1 Search & Download
4.2 Internet Configuration
5. Building a Membrane ...
5.1 The File Menu
5.2 Dealing with Molecules
5.3 Aligning Molecules
5.4 More about the 3D Feature
5.5 3D-Settings
5.6 Manage Title Section
6. Special Membrane Properties ...
6.1. Using Microdomains
6.2. Using Multilayers
7. Atomic Representation ...
7.1. About
7.2. Predefine Conformation
7.3. Changing Granularity / Coarse Graining
8. The Lipid Bilayer ...
8.1 Running a Membrane Algorithm
8.2 Included Algorithms
8.2.1 Linear Placing
8.2.2 Random Placing
8.2.3 Advanced Random Placing
8.2.4 Simulated Annealing
8.2.5 Distributor
8.2.6 Atom Level Minimizer
8.2.7 The Wanderer (Rookie)
9. Generating Output ...
9.1 Pdb output settings - Dealing with limitation and compatibility issues
9.2 Written Contents
9.3 Preview your Membrane
9.4 Saving the Membrane File
9.5 Rebuild Membrane Model from existing pdb file
9.6 Membrane Analysis with APL@Voro
10. Import / Manage Algorithms
11. More about the Editor ...
11.1 Future Plans / Known Issues
11.2 Cm2 Team
11.3 Copyright
11.4 List of external Sources and Packages
11.5 History
developer ...
Introduction
Library and Documentation
Creating a new Membrane Algorithm
Overriding the Methods from the interface
Essential Methods and Objects
Finishing your Membrane Packing Algorithm
Writing a good Membrane Algorithm
Example
Forcefield Development Hints
videos
publications
apl@voro ...
about
algorithms
screenshots & videos
forum